Director-Bioimage Analysis Center

Director-Bioimage Analysis Center

St. Jude Children’s Research Hospital, Memphis, TN, USA

Job ID 38440

Overview

We’re recruiting a Director for St. Jude Children’s Research Hospital’s BioImage Analysis Center. This critical role requires a strong leader with proven interdisciplinary experience to assemble a team of computational scientists and establish the computational infrastructure to meet institutional needs to analyze and quantitate microscopy imagery at large scales and high throughput.

Responsibilities

St. Jude is a leader in investing in and implementing emerging imaging technologies to support basic scientific and translational research. In this role, you will partner with research programs institution-wide to amplify discoveries made using St. Jude’s unique array of cutting-edge light and electron microscopes resources as well as high-content screening platforms. Other responsibilities include:

  •  Develop workflows for object detection & recognition, segmentation, classification, metric extraction, and statistical analysis of image data produced by research efforts ranging from the individual researcher up to programmatic, large-scale projects.
  • Direct a team in microscopy image data mining and image processing as well as utilizing existing commercial software packages or developing novel algorithms to extract biologically relevant information from data sets produced at SJCRH.

Our highly collaborative, mission-driven environment requires a team-oriented individual with excellent communication skills and the following qualifications:

Minimum Experience

  • Five (5) years of related experience. Experience in computing or statistical data analysis, as well as, programming experience in using Imaris, Amira, ImageJ or Fiji programs and operating within a Linux system is preferred

Minimum Education

  • Ph.D. in Physics, Computer Science, Electrical Engineering, or related field required

 

When you work at St. Jude, you enjoy:

 

Research that translates: Your work at St. Jude directly impacts patient care and advances discoveries that save the lives of children worldwide.

Stability and growth:  Thanks to generous donors and completive grant support, our scientific progress is never halted and you’ll enjoy unmatched resources to do the science you’ve always dreamed of doing.

Award-winning environment:  St Jude is consistently recognized by Fortune magazine as one of the “100 Best Companies to Work For” and has been named of one of Glassdoor’s top 10 “Best Places to Work” in 2018.

Constant learning: From in-depth training to world-class seminars and symposia, you’ll be given constant opportunities to expand your knowledge, learn new skills and grow in your career.

EEO Statement

St. Jude is an Equal Opportunity Employer

No Search Firms:

St. Jude Children’s Research Hospital does not accept unsolicited assistance from search firms for employment opportunities. Please do not call or email. All resumes submitted by search firms to any employee or other representative at St. Jude via email, the internet or in any form and/or method without a valid written search agreement in place and approved by HR will result in no fee being paid in the event the candidate is hired by St. Jude.

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Image Analysis Expert for Microscopy

Image Analysis Expert for Microscopy

Together with the Scientific IT Support (scits.unibe.ch) of the Faculty of Science, the
Microscopy Imaging Center (mic.unibe.ch) of the University of Bern opens a
position for an

Image Analysis Expert for Microscopy (80-100%)

Tasks

  • Optimise and deploy image and data analysis pipelines for current and new instruments at the Microscopy Imaging Center (MIC)
  • Support MIC users with image processing and analysis challenges
  • Support design of IT infrastructure (hardware and software) for new MIC instruments
  • Organise and implement MIC trainings on image processing, IT infrastructure usage and application software
  • Participate in MIC related research and development projects
Qualifications

  • PhD or equivalent in relevant discipline (bioinformatics, bioimaging, biomedical engineering, computer science, physics, applied mathematics biology etc)
  • Recognised experience in applying and/or developing image analysis tools with Fiji/ImageJ, Icy, Imaris, CellProfiler, MATLAB, Java or Python
  • Outstanding programming and data analysis skills (Python/R, C/C++, GPGPU, deep neural networks)
  • Microscopy/bioimaging experience and familiarity with biological data is an asset, interest in this field is pre-requisite
  • Experience with real-time systems and system administration is an asset
  • Strong team player with service-oriented work style and excellent English communication skills (German is an asset)
Conditions

  • Salary according to qualifications and cantonal regulations
  • Begin 2018-05-01 or by agreement
  • Two years with possible extension

The Microscopy Imaging Center at the University of Bern (MIC) is the interdepartmental platform for high-end microscopy. MIC provides access to state-ofthe-art imaging techniques for researchers from 12 institutes of 3 departments of the University of Bern as well as for external visitors. It collaborates closely with the Science IT Support (ScITS) unit from the Faculty of Science. The successful candidate will be embedded in the ScITS team which maintains university-wide, national and international knowledge networks and is associated with the Mathematical Institute. The ScITS working atmosphere is academic, responsive and cooperative. The office location is next to the Bern central railway station. The successful candidate will be member of the MIC commission. Questions regarding the position can be directed to the ScITS coordinator Dr. Sigve Haug or the MIC coordinator Dr. Ruth Lyck (sigve.haug@math.unibe.chruth.lyck@tki.unibe.ch). Women are encouraged to apply.

Please send your full application with transcripts of diplomas, CV, two references, relevant publications and motivation letter as a single PDF to sigve.haug@math.unibe.ch until March 26, 2018.

BIO-IMAGE ANALYST RESEARCHER

BioImage Analyst for scientific imaging platform

IBMC/i3S, Porto, Portugal

 

The IBMC – Instituto de Biologia Molecular e Celular is opening of an international selection tender for 1 vacancy of doctorate to perform duties of scientific research in the scientific area of Bio-Imaging, under a work contract with non-fixed term, in order to develop research activities on bio-image analysis at the i3S Advanced Light Microscopy scientific platform . The researcher should collaborate with the platform’s users by providing training and support to solve their problems of image analysis. Additionally, should collaborate in the organization of postgraduate courses in the area. Other functions may include mentoring master and doctoral students.

 

Admission requirements are:

General:

PhD Degree in engineering, mathematics, computer science, physics, biosciences or similar.

Specific:

– experience in digital image processing, analysis and quantification;

– experience with scientific image analysis open source software packages including ImageJ / Fiji;

– experience with programming languages: Matlab, Python, R or Java;

– experience in the design, construction and implementation of workflows for image analysis;

– knowledge of statistical analysis

– previous experience with biological or medical imaging is desirable.

 

 

More informations at: https://www.ibmc.up.pt/sites/default/files/bioimage_analyst_roteiro_paula_sampaio.pdf

 

For informal inquiries, please contact:

sampaio@ibmc.up.pt

 

Candidates shall submit their application from the 15th January 2018 to 10th February 2018 to: http://www.ibmc.up.pt/gestaocandidaturas/index.php?codigo=ROTEIRO1802